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Babu, Soumya Bharati
- Molecular diversity of Nilaparvata lugens (Stål.) (Hemiptera: Delphacidae) from India based on internal transcribed spacer 1 gene
Abstract Views :168 |
PDF Views:79
Authors
Govindharaj Guru-Pirasanna-Pandi
1,
Aashish Kumar Anant
1,
Jaipal Singh Choudhary
2,
Soumya Bharati Babu
1,
G. Basana-Gowda
1,
M. Annamalai
1,
Naveenkumar Patil
1,
Totan Adak
1,
P. Panneerselvam
1,
Prakash Chandra Rath
1
Affiliations
1 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, IN
2 ICAR-RCER Farming System Research Centre for Hill and Plateau Region, Ranchi 834 010, IN
1 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, IN
2 ICAR-RCER Farming System Research Centre for Hill and Plateau Region, Ranchi 834 010, IN
Source
Current Science, Vol 122, No 12 (2022), Pagination: 1392-1400Abstract
Brown planthopper, Nilaparvata lugens, is the major pest of rice in India and causes significant yield loss. It causes damage by sucking the plant sap leading to a characteristic symptom called ‘hopper burn’. The present study was undertaken to assess the genetic variability of N. lugens populations from different rice ecologies in India, to comprehend and assist in planning proper management strategies. We evaluated the molecular diversity in 17 N. lugens populations based on internal transcribed spacer 1 (ITSI) gene sequences. In all, 53 unique haplotypes were identified and their numbers varied from 1 to 10 in the sampled populations. Genetic diversity indices like nucleotide diversity, haplotype number, haplotype diversity and average number of nucleotide differences revealed low to high levels of genetic diversity among the populations. A highly significant negative relation of Fu’s F and Tajima’s D tests with insignificant sum of square deviation (SSD) values indicated possible recent expansion of N. lugens in different Indian regions with a population expansion time of 3.9 million years. A non-significant correlation in isolation pattern by distance indicated that geographic barriers present in India are inadequate to bring genetic differentiation among N. lugens from different migratory populations. In the present study, the ITSI gene sequence was used to analyse genetic structure among N. lugens in India.Keywords
Genetic Structure, Haplotypes, Molecular Diversity, Nilaparvata Lugens, RiceReferences
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- Genetic Analysis of Brown Planthopper, Nilaparvata lugens (Stål) (Hemiptera: Delphacidae) Based on Microsatellite Markers
Abstract Views :45 |
PDF Views:42
Authors
Soumya Bharati Babu
1,
Govindharaj Guru-Pirasanna-Pandi
1,
C. Parameswaran
1,
Jayaraj Padhi
2,
G. Basana-Gowda
1,
M. Annamalai
1,
Naveenkumar Patil
1,
Chanchala Meher
1,
S. Sabarinathan
1,
Prakash Chandra Rath
1
Affiliations
1 ICAR-National Rice Research Institute, Cuttack 753 006, IN
2 Odisha University of Agriculture and Technology, Bhubaneswar 751 003, IN
1 ICAR-National Rice Research Institute, Cuttack 753 006, IN
2 Odisha University of Agriculture and Technology, Bhubaneswar 751 003, IN
Source
Current Science, Vol 125, No 7 (2023), Pagination: 777-783Abstract
Brown planthopper, Nilaparvata lugens (Stål) is one of the most destructive pests of rice in Southeast Asia. It expresses a differential reaction to resistant rice cultivars and various insecticide groups in different geographic locations. Therefore, genetic diversity among N. lugens populations must be understood for their effective management. Hence, in the present study, the genetic structure and diversity of 22 N. lugens populations collected from 22 hotspot regions of India were analysed using with genomic simple sequence repeat (SSR) markers. Results revealed that the mean genetic diversity was 0.399 and polymorphic information content was 0.337 in the 30 selected SSR markers. Further, molecular variance revealed only a 2% variation among the populations and 98% within a population. In cluster and population structure analysis, all 22 populations were sub-grouped into three groups. Interestingly, the North and West Indian populations showed high genetic similarity and assembled into one cluster in cluster analysis. The East and South Indian populations were evenly segregated into the remaining two clusters. Similarly, the North and West Indian populations shared the same compartment in principal coordinate analysis. This variation might be associated with the N. lugens migration due to wind movement of the southwest monsoon in two branches, viz. Arabian Sea branch and Bay of Bengal branch. The present study provides molecular evidence for genetic variation among different populations of N. lugens in India. The information could be helpful to devise an efficient management strategy against this pest in different rice ecosystems.Keywords
Brown Planthopper, Genetic Diversity, Micro-Satellite Markers, Monsoon, Rice.References
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